Broad defects in epidermal cornification in atopic dermatitis (AD) identified through genomic analysis
Expression microarray · human · 33 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 33 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE16161_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA117185. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 33 more — browse all 33 samples with per-sample file links →
- GSE32924 Nonlesional atopic dermatitis skin is characterized by broad terminal differentiation defects and variable immune abnormalities 33 samples shares dermatitis, defects, atopic, broad
- GSE287810 iPSC-derived keratinocytes to study epidermal defects in atopic dermatitis [bulk RNA-seq] 6 samples shares dermatitis, epidermal, defects, atopic
- GSE262071 Atopic dermatitis complicated by recurrent eczema herpeticum is characterized by multiple, concurrent epidermal inflammatory endotypes 6 samples shares dermatitis, epidermal, atopic
- GSE133477 Crisaborole and atopic dermatitis skin biomarkers: an intrapatient randomized trial 242 samples shares dermatitis, atopic
- GSE130588 Dupilumab progressively improves systemic and cutaneous abnormalities in patients with atopic dermatitis 208 samples shares dermatitis, atopic
- GSE59294 Blocking IL-4Rα with dupilumab (REGN668/SAR231893) rapidly suppresses major pathomechanisms in the skin of severe atopic dermatitis patients 40 samples shares dermatitis, atopic
- GSE36842 Progressive Activation of Th2/Th22 characterizes acute and chronic atopic dermatitis 39 samples shares dermatitis, atopic
- GSE26952 Expression data for human epithelium from subjects with atopic dermatitis, psoriasis and nonatopic controls 16 samples shares dermatitis, atopic
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.