← BioTransfer GEO Dataset Finder
GEO series

[E-TABM-722] Transcription factor binding evolution in five vertebrates

GSE22078 Gallus gallus; Canis lupus familiaris; Monodelphis domestica; Homo sapiens; Mus musculus Genome binding/occupancy profiling by high throughput sequencing 61 samples Submitted 2010/06/02 Platform GPL10474Platform GPL10475Platform GPL10223Platform GPL9052Platform GPL9185
Summary
Five-vertebrate ChIP-seq reveals the evolutionary dynamics of trancription factor binding. The SRF files for this experiment can be found in the European Read Archive with study accession number ERP000054. ArrayExpress Submission Date: Apr 07 2010 ArrayExpress Release Date: Apr 08 2010 Publication Author List: Dominic Schmidt; Michael D Wilson; Benoit Ballester; Petra C Schwalie; Gordon D Brown; Aileen Marshall; Claudia Kutter; Stephen Watt; Celia P Martinez-Jimenz; Sarah MacKay; Iannis Talianidis; Paul Flicek; Duncan T Odom Publication Title: Transcription factor binding evolution in five vertebrates Person Roles: submitter Person Last Name: Flicek Person First Name: Paul Person Email: [email protected] Person Address: Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK Person Affiliation: EBI
This dataset
Open GSE22078 in finder → Find more ChIP / ATAC / CUT&Tag datasets →
Download

Direct links to NCBI, no account and no request form: the whole study as GSE22078_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 61 samples. Raw sequencing reads are also available from ENA.

Whole study · RAW.tar ↓ Series matrix ↓ All supplementary files ↗ Raw reads on ENA ↗

Also filed as BioProject PRJNA128961 and SRA study ERP000054. Searching any of these in the dataset finder brings you back here.

NCBI GEO page ↗ Paper (PMID 20378774) ↗
Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 61 more — browse all 61 samples with per-sample file links →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.