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Serine arginine-rich splicing factor (SRSF7) cooperates with the histone methyltransferase KMT5a to promote the type I interferon response via transcriptional activation of IRF7

GSE239845 Mus musculus Genome binding/occupancy profiling by high throughput sequencing 4 samples Submitted 2024/07/29 Platform GPL24247
Summary
Tight regulation of macrophage immune gene expression is required to fight infection without risking harmful inflammation. The contribution of RNA binding proteins (RBPs) to shaping the macrophage response to pathogens remains poorly understood. Transcriptomic analysis revealed that a member of the serine/arginine-rich (SR) family of mRNA processing factors, SRSF7, is required for optimal expression of a cohort of interferon stimulated genes (ISGs) in macrophages. Using genetic and biochemical assays, we discovered that in addition to its canonical role in regulating alternative splicing, SRSF7 drives transcription of interferon regulatory transcription factor 7 (IRF7) to promote antiviral immunity. At the Irf7 promoter, SRSF7 maximizes STAT1 transcription factor binding and RNA polymerase II elongation via cooperation with the H4K20me1 histone methyltransferase KMT5a (SET8). These studies define an unorthodox role for an SR protein in activating transcription and reveal an unappreciated RNA binding protein-chromatin network that orchestrates macrophage antiviral gene expression.
Published in
Serine/arginine-rich splicing factor 7 promotes the type I interferon response by activating Irf7 transcription
Scott HM, Smith MH, Coleman AK et al. · Cell reports 2024 · PMID 38393946 · doi:10.1016/j.celrep.2024.113816
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Also filed as BioProject PRJNA1001049 and SRA study SRP452647. Searching any of these in the dataset finder brings you back here.

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