Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [Visium: Spatial transcriptomics]

Direct links to NCBI, no account and no request form: the whole study as GSE267806_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1113155. Searching any of these in the dataset finder brings you back here.

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 6 more — browse all 6 samples with per-sample file links →

• GSE228360 Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation 24 samples
• GSE270387 Single cell profiling of peripheral blood mononuclear cells in diverse men with prostate cancer reveals lethal disease-associated immune signatures 165 samples
• GSE196198 Longitudinal single-cell multiomics data for different severity of COVID-19 100 samples
• GSE235715 Multi-scaled transcriptomics of chronically inflamed nasal epithelium reveals immune-epithelial dynamics and tissue remodeling in nasal polyp formation 60 samples
• GSE320042 High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes 38 samples
• GSE310797 Single cell and Spatial RNA-seq in Oral Squamous Cell Carcinoma with Different Stage 19 samples
• GSE189184 Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics 16 samples
• GSE253661 Longitudinal single-cell transcriptomics of monocytes, Tfh and gd Tcells following a control human malaria infection. 16 samples

Search all human RNA-seq datasets in GEO →