GEO series
Distinct NK Cell Function and Gene Expression in Children with Acute Lymphoblastic Leukemia in Remission Before and After Acute Exercise
GSE272928
Homo sapiens
Expression profiling by high throughput sequencing
36 samples
2025/07/17
GPL16791
Summary
Children and adolescents who have acute lymphoblastic leukemia (ALL), often display an impaired natural killer cell (NK) function. Brief bouts of exercise mobilize NK cells and influence their gene expression, but little is known about the effect of exercise on NK cell function and gene expression in pediatric ALL survivors, which remains unclear. This study examined the effect of exercise on NK gene expression and cytotoxic activity (NKCA) in pediatric ALL patients in remission. Nine B-cell ALL children in remission and 9 sex and age-matched healthy controls with no history of cancer (14.8±1 and 15±1 y/o, respectively; 2 girls per group) performed eight 2-min bouts of cycle ergometry at 60% of peak work rate (71±2% of V̇O 2 peak) interspersed with 1-min rest intervals. Circulating NK cells gene expression profile (RNA-seq) and NKCA (in vitro) were performed before and after exercise. NK cell function (NK cell cytotoxicity assay) and gene expression (RNAseq) analyses were performed. Exercise altered the expression of thousands of NK cell genes in both ALL and controls, with a distinct pattern in ALL both at baseline (294 Genes) and in response to exercise (179 genes). At baseline, nine gene pathways involved in NK cell function were affected, and following exercise, 28 pathways related to inflammatory response and cancer were impacted. NKCA was lower at baseline in survivors compared to controls. The reduced activity was partially mitigated following exercise but remained lower in ALL compared to controls. Exercise may improve NK cell function, specifically in immune surveillance in ALL children in remission, and has the potential to be used as adjunctive therapy in ALL. The differential gene expression response to exercise suggest that NK cells in ALL may adopt a different molecular strategy to fight infections or tumors.
Download
NCBI GEO page ↗
Paper (PMID 40881686) ↗
{# Names what the click gives you. "Open in finder" meant nothing to a
visitor who arrived from a search engine and has never seen the tool. #}
Find more
human RNA-seq datasets →
Similar datasets
- GSE328275 Single-cell RNA sequencing of CD45+ immune cells across primary tumor, sentinel tumor-draining lymph node, and axillary lymph node in treatment-naive triple-negative breast cancer 28 samples
- GSE341753 Cohesin loading at regulatory elements shapes 3D genome folding during erythropoiesis [RNA-Seq] 12 samples
- GSE319969 Spatial and Bulk Transcriptomic Profiling Defines the Molecular Evolution of Cutaneous Squamous Cell Carcinoma and Reveals Stage-Specific Biomarkers of Clinical Relevance [RNA-Seq] 24 samples
- GSE342462 Integrated transcriptomic and bioelectrical profiling of stem-like cellular states in a colorectal cancer using SdFFF and UHF-DEP 12 samples
- GSE313035 METIMMOX: Colorectal Cancer METastasis - Shaping Anti-tumor IMMunity by OXaliplatin 67 samples
- GSE339456 Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [RNA-seq] 35 samples
- GSE341139 A conserved HAND2-BMP5-SMAD1/5/9 axis drives hepatic stellate cell activation and extracellular matrix overproduction in multiple fibrotic etiologies 10 samples
- GSE274275 Effect of depletion of NSUN4 on gene expression of NCI-H226 cells [RNA-seq] 6 samples
Share this dataset
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.