GEO series
OpenTn5: Open-Source Resource for Robust and Scalable Tn5 Transposase Purification and Characterization [ATAC-Seq]
GSE273908
Homo sapiens
Genome binding/occupancy profiling by high throughput sequencing
20 samples
2025/09/02
GPL30882
Summary
Tagmentation is an efficient approach for sequencing library preparation, which combines DNA fragmentation by transposition of sequencing adapters, using the bacterial cut-and-paste transposase Tn5. Here we present an open-source protocol for the generation of multi-purpose hyperactive Tn5 transposase, including its benchmarking in CUT&Tag, bulk and single-cell ATAC-seq. The OpenTn5 protocol yields multi-milligram quantities of pG-Tn5E54K, L372P protein per liter of E. coli culture, sufficient for thousands of tagmentation reactions and the enzyme retains activity in storage for more than a year.
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Paper (PMID 39026714) ↗
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