The functional antagonism between SIRT2 and MOF regulates cell cycle progression and genome stability [RNA-seq]
RNA-seq (gene expression) · mouse · 18 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Mus musculus (mouse)
- Samples
- 18 samples: 6 conditions, mostly in triplicateGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- SIRT2 antagonizes MOF function during mitotic entryScience advances · 2026
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE277368_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1162050 and SRA study SRP533146. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 18 samples.
How we read this: 6 replicated groups read from 18 sample titles; they account for 18 of them. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM8521151 HeLa_WT_RNAseq_Rep1 HeLa_WT_RNAseq
- GSM8521152 HeLa_WT_RNAseq_Rep2 HeLa_WT_RNAseq
- GSM8521153 HeLa_WT_RNAseq_Rep3 HeLa_WT_RNAseq
- GSM8521154 HeLa_Kmut_RNAseq_Rep1 HeLa_Kmut_RNAseq
- GSM8521155 HeLa_Kmut_RNAseq_Rep2 HeLa_Kmut_RNAseq
- GSM8521156 HeLa_Kmut_RNAseq_Rep3 HeLa_Kmut_RNAseq
- GSM8521157 MEFs_WT_RNAseq_Rep1 MEFs_WT_RNAseq
- GSM8521158 MEFs_WT_RNAseq_Rep2 MEFs_WT_RNAseq
- GSM8521159 MEFs_WT_RNAseq_Rep3 MEFs_WT_RNAseq
- GSM8521160 MEFs_S2KO_RNAseq_Rep1 MEFs_S2KO_RNAseq
- GSM8521161 MEFs_S2KO_RNAseq_Rep2 MEFs_S2KO_RNAseq
- GSM8521162 MEFs_S2KO_RNAseq_Rep3 MEFs_S2KO_RNAseq
- GSM8521163 MEFs_MOFKO_RNAseq_Rep1 MEFs_MOFKO_RNAseq
- GSM8521164 MEFs_MOFKO_RNAseq_Rep2 MEFs_MOFKO_RNAseq
- GSM8521165 MEFs_MOFKO_RNAseq_Rep3 MEFs_MOFKO_RNAseq
- GSM8521166 MEFs_DKO_RNAseq_Rep1 MEFs_DKO_RNAseq
- GSM8521167 MEFs_DKO_RNAseq_Rep2 MEFs_DKO_RNAseq
- GSM8521168 MEFs_DKO_RNAseq_Rep3 MEFs_DKO_RNAseq
- GSE260456 DOT1L provides transcriptional memory through PRC1.1 antagonism [RNA-seq] 180 samples shares antagonism, rna-seq
- GSE241602 Dynamic Chromatin Alteration Induces Oncogenic Hijacking by Nuclear Factor I Family Proteins for Medulloblastoma Progression 30 samples shares progression
- GSE324714 Acquired genetic and cell state changes in IDH-mutant glioma progression [coculture experiments] 16 samples shares progression
- GSE99311 Enhancer reprogramming promotes pancreatic cancer progression and metastasis 136 samples shares progression
- GSE97442 Genetic and pharmacological restoration of TET2 function blocks stem cell self-renewal and progression of leukemia 80 samples shares progression
- GSE282171 Depression and Anxiety-Induced Metabolic Reprogramming Promotes Hepatocellular Carcinoma Progression through CBX5 Lactylation: Involvement of Taurocholate and PHGDH-Mediated Ferroptosis 28 samples shares progression
- GSE245730 HNF4G and FOXA1 are context-specific drivers of pancreatic cancer progression [ATAC-seq] 16 samples shares progression
- GSE253593 A Lactate-induced SREBF2-dependent genetic program drives an immunotolerant dendritic cell population during cancer progression 15 samples shares progression
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.