GEO series
CircRNA-mediated ceRNA regulatory networks: transcriptomic insights into obesity type 2 diabetes progression and treatment strategies.
GSE278204
Homo sapiens
Expression profiling by high throughput sequencing
30 samples
2025/02/19
GPL24676
Summary
To investigate the pathogenesis of diabetes and identify novel biomarkers, we analyzed circRNA and mRNA expression profiles in serum samples from obese diabetic patients (O-T2DM) using high-throughput RNA sequencing. Our results showed that 442 differentially expressed circRNAs (343 up-regulated and 99 down-regulated) and 2756 differentially expressed mRNAs (277 up-regulated and 2479 down-regulated) were significantly differentially expressed in the O-T2DM group compared with the Control group. The biological function of DEmRNAs was subsequently investigated using WGCNA and enrichment assays. Pathway analysis revealed that the differentially expressed mRNAs were enriched in T cell receptor, cellular senescence, NK cell-mediated cytotoxicity, IL-17, lipids and atherosclerosis, actin cytoskeleton, etc. The circRNA-miRNA-mRNA regulatory network constructed by combining theoretical prediction and clinical experimental data revealed the potential regulatory effects of hsa_circ_0060614 and hsa-mir-4668- 3p on MT2A gene. Expression levels of these three genes were verified in plasma samples from the O-T2DM group and the Control group using qRT-PCR. Our results provide a wealth of transcriptome data for further studies of obesity type 2 diabetes. The ceRNA regulatory network we obtained may have guiding significance for the diagnosis and treatment of O-T2DM.
Download
NCBI GEO page ↗
Paper (PMID 39953543) ↗
{# Names what the click gives you. "Open in finder" meant nothing to a
visitor who arrived from a search engine and has never seen the tool. #}
Find more
human RNA-seq datasets →
Similar datasets
- GSE328275 Single-cell RNA sequencing of CD45+ immune cells across primary tumor, sentinel tumor-draining lymph node, and axillary lymph node in treatment-naive triple-negative breast cancer 28 samples
- GSE341753 Cohesin loading at regulatory elements shapes 3D genome folding during erythropoiesis [RNA-Seq] 12 samples
- GSE319969 Spatial and Bulk Transcriptomic Profiling Defines the Molecular Evolution of Cutaneous Squamous Cell Carcinoma and Reveals Stage-Specific Biomarkers of Clinical Relevance [RNA-Seq] 24 samples
- GSE342462 Integrated transcriptomic and bioelectrical profiling of stem-like cellular states in a colorectal cancer using SdFFF and UHF-DEP 12 samples
- GSE313035 METIMMOX: Colorectal Cancer METastasis - Shaping Anti-tumor IMMunity by OXaliplatin 67 samples
- GSE339456 Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [RNA-seq] 35 samples
- GSE341139 A conserved HAND2-BMP5-SMAD1/5/9 axis drives hepatic stellate cell activation and extracellular matrix overproduction in multiple fibrotic etiologies 10 samples
- GSE274275 Effect of depletion of NSUN4 on gene expression of NCI-H226 cells [RNA-seq] 6 samples
Share this dataset
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.