Gene regulatory network analysis on snRNAseq revealed key regulators for hepatocellular carcinoma progression

Direct links to NCBI, no account and no request form: the whole study as GSE278324_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1166642 and SRA study SRP535461. Searching any of these in the dataset finder brings you back here.

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• GSE285963 Transcriptome profile of hepatocellular carcinoma in patients with atezolizumab plus bevacizumab therapy. 84 samples
• GSE317207 Transcriptomic profiling of human hepatocellular carcinoma biopsy samples using bulk RNA-seq 33 samples
• GSE299340 Single-cell RNA sequencing reveals B cell-related immunosuppressive landscape and a potential suppressor in hepatocellular carcinoma 10 samples
• GSE202379 Single Nuclei RNA-Seq to map progression of non-alcoholic fatty liver disease (NAFLD) in patients II 59 samples
• GSE198315 Multiregional single-cell profiling reveals extensive field cancerization and an immunosuppressive microenvironment in oral squamous cell carcinoma 36 samples
• GSE339456 Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [RNA-seq] 35 samples
• GSE291890 Single-Cell RNA Sequencing Unveils Macrophage Involvement in Aortic Valve Stenosis Progression 33 samples
• GSE319969 Spatial and Bulk Transcriptomic Profiling Defines the Molecular Evolution of Cutaneous Squamous Cell Carcinoma and Reveals Stage-Specific Biomarkers of Clinical Relevance [RNA-Seq] 24 samples

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