Distinct Vps34-orchestrated signaling processes dictate the transitional heterogeneity and functional adaptation of effector Treg cells.
ChIP-seq / ATAC-seq (genome binding and open chromatin) · mouse · 55 samples
- What it is
- ChIP-seq / ATAC-seq (genome binding and open chromatin)Where proteins bind the genome, or which regions are open and active.
- Organism
- Mus musculus (mouse)
- Samples
- 55 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
- Paper
- Vps34-orchestrated lipid signaling processes regulate the transitional heterogeneity and functional adaptation of effector regulatory T cellsPLoS biology · 2025
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE279606_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: Look for peak files (.bed, .narrowPeak) and signal tracks (.bigWig) among the supplementary files; the raw reads are on ENA.
Also filed as BioProject PRJNA1173589 and SRA study SRP548631. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 55 more — browse all 55 samples with per-sample file links →
- GSE283255 Distinct Vps34-orchestrated signaling processes dictate the transitional heterogeneity and functional adaptation of effector Treg cells [ATAC-seq2] 14 samples shares vps34-orchestrated, heterogeneity, transitional, adaptation, processes, distinct, effector, dictate
- GSE283256 Distinct Vps34-orchestrated signaling processes dictate the transitional heterogeneity and functional adaptation of effector Treg cells [ATAC-seq1] 10 samples shares vps34-orchestrated, heterogeneity, transitional, adaptation, processes, distinct, effector, dictate
- GSE262713 TRIM28-dependent developmental heterogeneity determines cancer susceptibility through distinct epigenetic states 182 samples shares heterogeneity, distinct
- GSE263021 TRIM28-dependent developmental heterogeneity determines cancer susceptibility through distinct epigenetic states [RNA-seq - matched healthy and tumor tissues] 41 samples shares heterogeneity, distinct
- GSE294857 Distinct hepatocyte adaptations during gestation and lactation [pregnant_liver_mm10] 31 samples shares adaptation, distinct
- GSE290434 A stress response axis in tumor-associated macrophages dictates phenotype heterogeneity and immunotherapy evasion 21 samples shares heterogeneity, dictate
- GSE327449 Heterogeneity in hematopoietic stem cell enables adaptation to the aged microenvironment [scRNA-seq] 12 samples shares heterogeneity, adaptation
- GSE294859 Distinct hepatocyte adaptations during gestation and lactation [pregnant_liver_mm10_CUT_RUN] 10 samples shares adaptation, distinct
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.