← BioTransfer GEO Dataset Finder
GEO series

SP6 safeguards human multipotent trophoblasts from DNA damage-induced ageing by shaping DNA-PK complex

GSE282143 Homo sapiens Genome binding/occupancy profiling by high throughput sequencing 5 samples Submitted 2026/06/10 Platform GPL29480
Summary
The placenta can be threatened by DNA damage caused by genotoxic events. However, how placental trophoblasts coordinate cell type-restricted mechanisms in response to DNA damage and how they maintain genome stability remains elusive. We previously reported that the transcription factor SP6 regulates the fate of human cytotrophoblasts (CTs) and trophoblast stem cells (TSCs). Here, we demonstrate that SP6 interacts with DNA-PKcs in CTs and TSCs to shape the phosphorylation pattern of this kinase for DNA damage repair (DDR), a role that is independent of its transcriptional activity. Lack of SP6 leads to the inactivation of DNA-PKcs, defects in DNA-PK complex assembly and DDR, and eventually cell senescence. Moreover, pharmaceutically or genetically targeting OTUB1-SP6 regulatory axis, which controls the dynamic turnover of cellular SP6 during DDR, can reset the susceptibility of CTs or TSCs to genotoxic stress-induced DNA damage. Taken together, these findings identify a CT- or TSC-specific DDR mechanism, and we propose a potential druggable target for mitigating DNA damage and cell senescence-related human placental diseases.
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE282143_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 5 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1187465 and SRA study SRP545823. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 5 more — browse all 5 samples with per-sample file links →

Similar datasets

Search all human ChIP / ATAC / CUT&Tag datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.