Fate Erasure Logic of Gene Networks Underlying Direct Neuronal Conversion of Somatic Cells by MicroRNAs
Non-coding RNA profiling · human · 66 samples
- What it is
- Non-coding RNA profilingLevels of RNAs that do not code for proteins, such as miRNA or lncRNA.
- Organism
- Homo sapiens (human)
- Samples
- 66 samples: 62 distinct titles, 2 of them repeatedGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Fate erasure logic of gene networks underlying direct neuronal conversion of somatic cells by microRNAsCell reports · 2025
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE283010_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
Also filed as BioProject PRJNA1191437 and SRA study SRP547991. Searching any of these in the dataset finder brings you back here.
How we read this: Read from 66 sample titles: 62 distinct titles with little repetition. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM8654533 hDF_NS_A
- GSM8654534 hDF_NS_B
- GSM8654535 hDF_9124_A
- GSM8654536 hDF_9124_B
- GSM8654537 hDuF_NS_A
- GSM8654538 hDuF_NS_B
- GSM8654539 hDuF_9124_A
- GSM8654540 hDuF_9124_B
- GSM8654541 hAst_NS_A
- GSM8654542 hAst_NS_B
- GSM8654543 hAst_9124_A
- GSM8654544 hAst_9124_B
- GSM8654545 hBVSMC_NS_A
- GSM8654546 hBSVSMC_NS_B
- GSM8654547 hBVSMC_9124_A
- GSM8654548 hBVSMC_9124_B
- GSM8654549 hBVP_NS_A
- GSM8654550 hBVP_NS_B
- GSM8654551 hBVP_9124_A
- GSM8654552 hBVP_9124_B
- GSM8654553 AG13369 Fib A
- GSM8654554 AG13369 Fib B
- GSM8654555 AG13369 miN A
- GSM8654556 AG13369 miN B
- GSM8654557 AG08379 Fib A
- GSM8654558 AG08379 Fib B
- GSM8654559 AG08379 miN A
- GSM8654560 AG08379 miN B
- GSM8654561 AG06858 Fib A
- GSM8654562 AG06858 Fib B
- GSM8654563 AG06858 miN A
- GSM8654564 AG06858 miN B
- GSM8654565 GM23974 Fib A
- GSM8654566 GM23974 Fib B
- GSM8654567 GM23974 miN A
- GSM8654568 GM23974 miN B
- GSM8654569 GM23966 Fib A
- GSM8654570 GM23966 Fib B
- GSM8654571 GM23966 miN A
- GSM8654572 GM23966 miN B
+ 26 more — browse all 66 samples with per-sample file links →
- GSE273787 Pathways underlying selective neuronal vulnerability in Alzheimer's disease: contrasting the vulnerable locus coeruleus to the resilient substantia nigra 44 samples shares underlying, neuronal
- GSE314625 WSTF deficiency reprograms regulatory networks by linking locus‑specific chromatin remodeling to altered isoform expression and misdirected signaling [mRNA-seq] 18 samples shares networks, direct
- GSE304368 Schizophrenia risk gene ZNF536 modulates retinoic acid response and neuronal gene networks in SH-SY5Y cells 18 samples shares networks, neuronal
- GSE292624 Dissociated human cerebral organoids on micro-electrode arrays develop neuronal networks 13 samples shares networks, neuronal
- GSE325907 Placental gene co-expression networks and mediation analysis identifies pathways and genes associated with birthweight 319 samples shares networks
- GSE285217 Digital transformation of herbal medicine: Conversion to biological entity data using Qi related decoction and constituent herbal medicine-induced transcriptome sequencing_third_A549 270 samples shares conversion
- GSE283054 Digital transformation of herbal medicine: Conversion to biological entity data using Qi related decoction and constituent herbal medicine-induced transcriptome sequencing_third_HepG2 270 samples shares conversion
- GSE285424 Digital transformation of herbal medicine: Conversion to biological entity data using Qi related decoction and constituent herbal medicine-induced transcriptome sequencing [HT29] 270 samples shares conversion
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.