← BioTransfer GEO Dataset Finder
GEO series

Dysregulated cell states revealed by single-cell multiomics in mild malformations of cortical development with oligodendroglial hyperplasia in epilepsy

GSE284073 Homo sapiens Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing 8 samples Submitted 2025/05/12 Platform GPL24676
Summary
Mild malformations of cortical development with oligodendroglial hyperplasia in epilepsy (MOGHE) is a distinct form of focal epilepsy characterized by oligodendroglial clusters, heterotopic neurons, and hypomyelination in the white matter. While previous studies have implicated somatic mutations in the SLC35A2 gene, the cellular and molecular mechanisms underlying MOGHE pathogenesis remain largely unknown. In this study, we utilized multiomic single-nuclei sequencing to profile the gene expression and chromatin accessibility of MOGHE lesions at cellular resolution. Analysis of grey and white matter regions from two MOGHE patients revealed significant alterations in cellular composition, highlighting an expansion of oligodendrocytes and the presence of heterotopic neurons within the subcortical white matter. We identified a population of MOGHE-associated oligodendrocytes, which were enriched in genes involved in immune response, myelination disruption, and epilepsy-related pathways, and shared transcriptional similarities with pathological oligodendrocytes identified in other neurological disorders. Further analysis of heterotopic neurons in MOGHE revealed the upregulation of genes associated with neuronal migration and the Wnt signaling pathway, suggesting a potential mechanism underlying their atypical localization. Altogether, this high-resolution cellular characterization of MOGHE unveils the neuronal and glial subpopulations affected in the disease and provide novel insights into the pathophysiological mechanisms of MOGHE.
Published in
Cell type mapping of mild malformations of cortical development with oligodendroglial hyperplasia in epilepsy using single-nucleus multiomics
Galvão IC, Lemoine M, Kandratavicius L et al. · Epilepsia 2025 · PMID 40293058 · doi:10.1111/epi.18413
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE284073_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 8 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1196959 and SRA study SRP550900. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 8 more — browse all 8 samples with per-sample file links →

Similar datasets

Search all human ChIP / ATAC / CUT&Tag datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.