← BioTransfer GEO Dataset Finder
GEO series

Regulation of Mammalian Cellular Metabolism by Endogenous Cyanide Production [Glycine_RNA-Seq]

GSE286105 Homo sapiens Expression profiling by high throughput sequencing 6 samples Submitted 2025/01/09 Platform GPL24676
Summary
Small, gaseous molecules – such as nitric oxide (NO), carbon monoxide (CO) and hydrogen sulfide (H2S) are produced as signalling molecules in mammalian cells. Here, we show that low concentrations of cyanide are generated endogenously in various mammalian tissues and cells. We detect cyanide in several cellular compartments of human cells and in various tissues and the blood of mice. Cyanide production is stimulated by glycine, occurs at the low pH of lysosomes and requires peroxidase activity. When generated at a specific rate, cyanide exerts stimulatory effects on mitochondrial bioenergetics, cell metabolism, and cell proliferation, but impairs cellular bioenergetics at high concentrations. Cyanide can modify cysteine residues via protein S-cyanylation, which is detectable basally in cells and mice, and increases in response to glycine. Low-dose cyanide supplementation exhibits cytoprotective effects in hypoxia and reoxygenation models in vitro and in vivo. Conversely, pathologically elevated cyanide production in nonketotic hyperglycinemia is detrimental to cells. Our findings indicate that cyanide should be considered part of the same group of endogenous mammalian regulatory gasotransmitters as NO, CO and H2S.
Published in
Regulation of mammalian cellular metabolism by endogenous cyanide production
Zuhra K, Petrosino M, Janickova L et al. · Nature metabolism 2025 · PMID 40033006 · doi:10.1038/s42255-025-01225-w
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE286105_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1207943 and SRA study SRP556133. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 6 more — browse all 6 samples with per-sample file links →

Similar datasets

Search all human RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.