GEO series
Epigenetic Silencing of LTR12C family in OCI-AML3
GSE288771
Homo sapiens
Genome binding/occupancy profiling by high throughput sequencing
16 samples
2026/01/16
GPL34284
Summary
Chromatin accessibility at LTR12C family has been shown to b required to maintain stemness properties in leukemic stem cells. Here using CRISPRi epigenetic silencing strategy, we targetted LTR12C family in OCI-AML3 cell line. Our ATAC-seq and CUT&RUN data demonstrate efficient targeting and silencing of entire family using only 4 sgRNAs. Epigenetic silencing of this family leads to slower growth in targeted OCI-AML3 cells compared to control cells.
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Paper (PMID 42082719) ↗
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