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Targeting p85β condensates by RNA therapy inhibits liver cancer progression

GSE291263 Homo sapiens Expression profiling by high throughput sequencing 6 samples Submitted 2025/05/01 Platform GPL24676
Summary
PI3K complex consists of catalytic subunit p110s and regulatory subunit p85s. Emerging evidence indicates that p110-free p85 subunits play pivotal roles in diverse biological processes, including cancer progression. In this study, we demonstrate the oncogenic function and underlying mechanism of p110-free p85β in hepatocellular carcinoma (HCC) development. PIK3R2/p85β is highly expressed in HCC tissues and correlates with worse overall survival of HCC patients. Nuclear p85β, but not its cytoplasmic counterpart, exhibits oncogenic activity. In the nucleus of HCC cells, p85β undergoes liquid-liquid phase separation (LLPS) and specifically accumulates in the fibrillar centers of nucleoli, where it drives HCC progression. Within the nucleolar compartment, p85β directly interacts with and stabilizes POLR1A, the catalytic core subunit of RNA polymerase I, thereby enhancing rRNA biosynthesis and maintaining HCC stemness. Furthermore, we develop an engineered circular RNA that encodes a peptide containing p110α ABD domain, which effectively suppresses HCC tumor growth by simultaneously disrupting p85β/POLR1A condensates and inhibiting PI3K/AKT signaling pathway. Our findings not only elucidate the critical role of p85β biomolecular condensates in HCC tumorigenesis but also establish a novel RNA-based therapeutic strategy for HCC intervention.
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Direct links to NCBI, no account and no request form: the whole study as GSE291263_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1232683 and SRA study SRP568405. Searching any of these in the dataset finder brings you back here.

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