Molecular Subtypes of Human Skeletal Muscle in Cancer Cachexia
Non-coding RNA profiling · rat · 185 samples
- What it is
- Non-coding RNA profilingLevels of RNAs that do not code for proteins, such as miRNA or lncRNA.
- Organism
- Rattus norvegicus (rat)
- Samples
- 185 samples: 185 samples, each with a distinct title — no replicated groupsGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Molecular subtypes of human skeletal muscle in cancer cachexiaNature · 2025
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE292053_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
Also filed as BioProject PRJNA1236386 and SRA study SRP570560. Searching any of these in the dataset finder brings you back here.
Any grouping that defines a comparison lives in the sample characteristics, which GEO records separately from the titles.
How we read this: Read from 185 sample titles: 185 distinct titles with little repetition. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM8059487 AB_1, Colorectal
- GSM8059488 AB_2, Colorectal
- GSM8059489 AB_3, Pancreas
- GSM8059490 AB_4, Pancreas
- GSM8059491 AB_5, Pancreas
- GSM8059492 AB_6, Pancreas
- GSM8059493 AB_7, Pancreas
- GSM8059494 AB_8, Colorectal
- GSM8059495 AB_9, Pancreas
- GSM8059496 AB_10, Colorectal
- GSM8059497 AB_11, Colorectal
- GSM8059498 AB_12, Colorectal
- GSM8059499 AB_13, Pancreas
- GSM8059500 AB_14, Colorectal
- GSM8059501 AB_15, Colorectal
- GSM8059502 AB_16, Pancreas
- GSM8059503 AB_17, Pancreas
- GSM8059504 AB_18, Colorectal
- GSM8059505 AB_19, Pancreas
- GSM8059506 AB_20, Pancreas
- GSM8059507 AB_21, Pancreas
- GSM8059508 AB_22, Colorectal
- GSM8059509 AB_23, Pancreas
- GSM8059510 AB_24, Pancreas
- GSM8059511 AB_25, Colorectal
- GSM8059512 AB_26, Pancreas
- GSM8059513 AB_27, Colorectal
- GSM8059514 AB_28, Pancreas
- GSM8059515 AB_29, Colorectal
- GSM8059516 AB_30, Colorectal
- GSM8059517 AB_31, Pancreas
- GSM8059518 AB_32, Colorectal
- GSM8059519 AB_33, Colorectal
- GSM8059520 AB_34, Pancreas
- GSM8059521 AB_35, Colorectal
- GSM8059522 AB_36, Pancreas
- GSM8059523 AB_37, Colorectal
- GSM8059524 AB_38, Colorectal
- GSM8059525 AB_39, Pancreas
- GSM8059526 AB_40, Colorectal
+ 145 more — browse all 185 samples with per-sample file links →
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.