GEO series
FOXM1 drives metabolic adaptations in colorectal cancer brain metastases and represents a potential therapeutic target
GSE292184
Homo sapiens
Expression profiling by high throughput sequencing
17 samples
2026/03/15
GPL18573
Summary
Colorectal cancer (CRC) is a leading cause of cancer-related mortality in the Western world. While brain metastasis (BMs) are relatively uncommon in CRC, they represent the fourth most frequent cause of BMs overall and their occurrence is increasingly recognized as a complication in advanced CRC, associated with poor prognosis and limited treatment options. The brain microenvironment presents unique metabolic challenges, including low oxygen levels and restricted lipid availability. In order to survive in this hostile environment, CRC cells must acquire metabolic adaptations allowing them to survive and proliferate. To identify key drivers that enable CRC cells to metastasize to and survive within the brain, we conducted a transcriptomic screen of CRC BMs. Among the upregulated genes, FOXM1 was identified, a transcription factor critical for tumor progression. This was further validated by immunohistochemistry in human samples. To study the role of brain microenvironment in mediating FOXM1 upregulation, CRC cells were cultured in either astrocyte-conditioned media (A-CM) or compared to hepatocyte-conditioned media (H-CM). CRC cells exposed to A-CM exhibited markedly higher FOXM1 expression. Moreover, using an in vivo model of intracranial CRC BM mouse model demonstrated significant FOXM1 overexpression in CRC cells following brain injection. And notably, our study revealed a significant correlation between FOXM1 and fatty acid synthase (FASN) in the brain microenvironment. These findings suggest that FOXM1 plays a key role in CRC brain metastasis and may serve as a promising therapeutic target. Targeting FOXM1 could provide novel treatment strategies for CRC patients with BMs, potentially improving outcomes in this challenging disease setting.
Download
NCBI GEO page ↗
Paper (PMID 42036506) ↗
{# Names what the click gives you. "Open in finder" meant nothing to a
visitor who arrived from a search engine and has never seen the tool. #}
Find more
human RNA-seq datasets →
Similar datasets
- GSE328275 Single-cell RNA sequencing of CD45+ immune cells across primary tumor, sentinel tumor-draining lymph node, and axillary lymph node in treatment-naive triple-negative breast cancer 28 samples
- GSE341753 Cohesin loading at regulatory elements shapes 3D genome folding during erythropoiesis [RNA-Seq] 12 samples
- GSE319969 Spatial and Bulk Transcriptomic Profiling Defines the Molecular Evolution of Cutaneous Squamous Cell Carcinoma and Reveals Stage-Specific Biomarkers of Clinical Relevance [RNA-Seq] 24 samples
- GSE313035 METIMMOX: Colorectal Cancer METastasis - Shaping Anti-tumor IMMunity by OXaliplatin 67 samples
- GSE339456 Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [RNA-seq] 35 samples
- GSE342462 Integrated transcriptomic and bioelectrical profiling of stem-like cellular states in a colorectal cancer using SdFFF and UHF-DEP 12 samples
- GSE336982 Obesity Promotes Lung Carcinogenesis Through Airway Immune Dysfunction 183 samples
- GSE330029 Temporal changes in metabolism guide oligodendrocyte precursor cell dynamics in aging and multiple sclerosis [BulkRNAseq] 108 samples
Share this dataset
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.