Transcriptional remodeling by OTX2 directs specification and patterning of mammalian definitive endoderm [PS_CUTnRUN]

Direct links to NCBI, no account and no request form: the whole study as GSE294520_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 4 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1250433 and SRA study SRP578398. Searching any of these in the dataset finder brings you back here.

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• GSE283906 RXR-Mediated Remodeling of Transcriptional and Chromatin Landscapes in APP Mouse Brain: Insights from Integrated Single-Cell RNA and ATAC Profiling 10 samples
• GSE331488 A global view of cell-type-specific temporal dynamics in mammalian aging [I] 771 samples
• GSE331489 A global view of cell-type-specific temporal dynamics in mammalian aging [II] 725 samples
• GSE289108 Neurons undergo IFNγ-driven persistent epigenetic shifts and synaptic remodeling in the inflamed brain [ChIP-Seq] 57 samples
• GSE325776 Evolutionary transfer learning enables organism-wide inference of mammalian enhancer landscapes 36 samples
• GSE324864 HP1B and H3K9me3 Regulate Olfactory Receptor Choice and 2 Transcriptional Identity [ChIP-seq] 28 samples
• GSE319420 Uncovering Critical Lysines in Mammalian Histone H3 with High-Throughput CRISPR Prime Editing [CUT&Tag] 26 samples

Search all mouse ChIP / ATAC / CUT&Tag datasets in GEO →