Therapy of allergic rhinitis using ribavirin spray to clear nasal commensal viruses
RNA-seq (gene expression) · mouse · 24 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Mus musculus (mouse)
- Samples
- 24 samples: 12 × VGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Therapy of allergic rhinitis using ribavirin spray to clear nasal commensal virusesSignal transduction and targeted therapy · 2026
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE297096_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1262508 and SRA study SRP585003. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 12 samples.
How we read this: 1 replicated groups read from 24 sample titles; they account for 12 of them. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM8983664 V01 V
- GSM8983665 V02 V
- GSM8983666 V03 V
- GSM8983667 R01
- GSM8983668 R02
- GSM8983669 R03
- GSM8983670 V04 V
- GSM8983671 V05 V
- GSM8983672 V06 V
- GSM8983673 R04
- GSM8983674 R05
- GSM8983675 R06
- GSM8983676 V07 V
- GSM8983677 V08 V
- GSM8983678 V09 V
- GSM8983679 R07
- GSM8983680 R08
- GSM8983681 R09
- GSM8983682 V10 V
- GSM8983683 V11 V
- GSM8983684 V12 V
- GSM8983685 R10
- GSM8983686 R11
- GSM8983687 R12
- GSE266238 Therapy of allergic rhinitis using ribavirin spray to clear nasal commensal viruses 4 samples shares ribavirin, commensal, allergic, rhinitis, therapy, viruses, spray, clear
- GSE271863 Therapy of allergic rhinitis using ribavirin spray to clear nasal commensal viruses 2 samples shares ribavirin, commensal, allergic, rhinitis, therapy, viruses, spray, clear
- GSE246623 Systematic transcriptome and molecular docking analyses reveals that Cirsium japonicum mitigates allergic nasal inflammation through regulation of NRF2-mediated mucin production in an allergic rhinitis mouse model 15 samples shares allergic, rhinitis
- GSE300948 Immune dynamics in allergic mice small intestines after allergen-encapsulating nanoparticle therapy 5 samples shares allergic, therapy
- GSE52804 Genes related to allergen avoidance in allergic rhinitis mouse model 9 samples shares allergic, rhinitis
- GSE269257 A lack of commensal microbiota influences the male reproductive tract intergenerationally in mice 62 samples shares commensal
- GSE320380 Competition between commensal protists shapes gut mucosal immunity in mice 59 samples shares commensal
- GSE283666 Gut Commensal Parabacteroides goldsteinii mitigates LRRK2 Parkinsonism through reducing neuroinflammation and multifaceted effects on gut homeostasis [RNA-seq] 54 samples shares commensal
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.