ATAC-seq of E9.5 Neural Tube defects mouse brain and E9.5 normal mouse brains

Direct links to NCBI, no account and no request form: the whole study as GSE299189_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 4 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1273049 and SRA study SRP590384. Searching any of these in the dataset finder brings you back here.

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+ 4 more — browse all 4 samples with per-sample file links →

• GSE283906 RXR-Mediated Remodeling of Transcriptional and Chromatin Landscapes in APP Mouse Brain: Insights from Integrated Single-Cell RNA and ATAC Profiling 10 samples
• GSE332794 Epigenomic profiling of H3K27ac in mouse brain regions under morphine and LPS exposure 206 samples
• GSE279088 Molecular dynamics driving phenotypic divergence among KRAS mutants in pancreatic tumorigenesis [ATAC-Seq] 74 samples
• GSE289108 Neurons undergo IFNγ-driven persistent epigenetic shifts and synaptic remodeling in the inflamed brain [ChIP-Seq] 57 samples
• GSE264614 Emerging cooperativity between Oct4 and Sox2 governs the pluripotency network in mouse early embryos [ATAC-seq] 44 samples
• GSE302858 Multi-tier signaling and epigenomic reprogramming drive microglial inflammatory states and functions associated with demyelination [ATAC-seq] 42 samples
• GSE304037 Decoupling oxidative resilience from reprogramming to rejuvenate the RPE and restore vision [GSTA4_ATAC-seq_1] 42 samples
• GSE319820 Efficient in vivo pharmacological inhibition of ∆FOSB with YL-0441 in brain 38 samples

Search all mouse ChIP / ATAC / CUT&Tag datasets in GEO →