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TET3 Promotes Tumor Immune Evasion Through Negative Regulation of Type I Interferon Signaling [ChIP-Seq]

GSE300463 Homo sapiens Genome binding/occupancy profiling by high throughput sequencing 8 samples Submitted 2026/06/26 Platform GPL24676
Summary
The Ten-eleven translocation (TET) family genes, which encode 5-methylcytosine (5mC) dioxygenases, have been described as tumor suppressors or oncogenes in various cancers. However, the functional role of TET3 in cancer immunity and the underlying molecular mechanisms remain incompletely understood. Here, we reported that TET3 restrains the innate immune response in MCF7 and B16F10 cells. Mechanistically, TET3 does not influence the generation of endogenous dsRNA but represses the expression of major dsRNA sensor genes (i.e., MDA5 and RIG-I) as well as the activation of JAK-STAT1 pathway. Importantly, depletion of Tet3 in B16F10 melanoma cells significantly curbed the synergistic tumor growth, accompanied with increased proportion of tumor-infiltrating CD4+ T cells, CD8+ T cells and dendritic cells. Analysis of the TCGA data also revealed elevated expression of TET3 in most types of cancer. Notably, elevated TET3 expression levels were inversely associated with overall survival rate and exhibited a negative correlation with tumor-infiltrating cytotoxic CD8+ T cells. Taken together, our findings identify TET3 as a negative regulator of type I interferon signaling, suggesting that TET3 may be a new target of anti-tumor immunity and immunotherapy.
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Direct links to NCBI, no account and no request form: the whole study as GSE300463_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 8 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1281000 and SRA study SRP594094. Searching any of these in the dataset finder brings you back here.

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