GEO series
Decoding Schwann cell activation in pancreatic cancer neural invasion by mimicking nerve injury responses and using spatial transcriptomics
GSE303707
Homo sapiens
Expression profiling by high throughput sequencing
21 samples
2026/07/25
GPL24676
Summary
Perineural invasion (PNI) is a critical neuropathic change in pancreatic cancer, driven by cancer-nerve interactions, where Schwann cells (SC) undergo reprogramming similar to nerve injury, promoting tumor spread. Despite this, the molecular mechanisms underlying SC activation and their involvement in extrapancreatic PNI remain poorly understood. In this study, we drew an analogy between the process of PNI and nerve injury, identifying six nerve injury-related genes (ARRDC4, ATF3, CBFB, NAV2, SNTB1, and TOX) that are highly expressed in SC and implicated in PNI. To certify the role of the selected six genes in neural invasion, the expression of these genes in N008 were knockdown by siRNA.After knocking down the expression of these six genes in N008 cells and performing RNA sequencing, it was found that the knockdown of these genes was associated with the activation of neural pathways, such as axon regeneration, Schwann cell differentiation, axonogenesis, and neurogenesis ,suggesting that these genes likely influence the functions of periphery nervous system.
Download
NCBI GEO page ↗
{# Names what the click gives you. "Open in finder" meant nothing to a
visitor who arrived from a search engine and has never seen the tool. #}
Find more
human RNA-seq datasets →
Similar datasets
- GSE328275 Single-cell RNA sequencing of CD45+ immune cells across primary tumor, sentinel tumor-draining lymph node, and axillary lymph node in treatment-naive triple-negative breast cancer 28 samples
- GSE341753 Cohesin loading at regulatory elements shapes 3D genome folding during erythropoiesis [RNA-Seq] 12 samples
- GSE319969 Spatial and Bulk Transcriptomic Profiling Defines the Molecular Evolution of Cutaneous Squamous Cell Carcinoma and Reveals Stage-Specific Biomarkers of Clinical Relevance [RNA-Seq] 24 samples
- GSE313035 METIMMOX: Colorectal Cancer METastasis - Shaping Anti-tumor IMMunity by OXaliplatin 67 samples
- GSE342462 Integrated transcriptomic and bioelectrical profiling of stem-like cellular states in a colorectal cancer using SdFFF and UHF-DEP 12 samples
- GSE339456 Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [RNA-seq] 35 samples
- GSE199939 Comprehensive transcriptomic analysis of immune-related genes in diabetic foot ulcers: New insights into mechanisms and therapeutic targets 21 samples
- GSE336982 Obesity Promotes Lung Carcinogenesis Through Airway Immune Dysfunction 183 samples
Share this dataset
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.