← BioTransfer GEO Dataset Finder
GEO series

Developing Midbrain-like Organoid of Gaucher Disease as A Platform for Drug Assessment

GSE303993 Homo sapiens Expression profiling by high throughput sequencing 6 samples Submitted 2026/04/17 Platform GPL24676
Summary
Gaucher disease (GD) is a lysosomal storage disorder caused by GBA1 mutations, leading to defective acid β-glucosidase (GCase) and accumulation of glucosylsphingolipids, causing inflammation and neurodegeneration. We developed midbrain-like organoids (MLOs) from induced pluripotent stem cells (iPSCs) of nGD patients with GBA1L444P/P415R and GBA1L444P/RecNcil mutations to model nGD brain pathogenesis. These nGD MLOs exhibited GCase deficiencies, reduced enzyme activities, lipids accumulation, transcriptomic alterations, and impaired dopaminergic neuron differentiation, mirroring nGD pathology. GBA1 correction mediated by CRISPR/Cas9 restored GCase activity, normalized lipids levels, and rescued dopaminergic neuron function, confirming the causal role of GBA1 mutations during early brain development. Using this novel platform, we further evaluated therapeutic strategies, including SapC-DOPS nanovesicles delivering GCase, AAV9-GBA1 gene therapy, and substrate reduction therapy (SRT) with GZ452, a glucosylceramide synthase (GCS) inhibitor currently under clinical investigation. These treatments either restored GCase activity, and/or reduced lipid accumulation, improved lysosomal function, and partially corrected dysregulated neural development and lysosomal pathways identified by transcriptomic analysis. These findings highlight MLOs as a physiologically relevant platform for studying nGD mechanisms and testing novel therapies, offering insights into potential treatments for this devastating disorder.
Published in
Patient-specific midbrain organoids with CRISPR correction recapitulate neuronopathic Gaucher disease phenotypes and enable evaluation of novel therapies
Lin Y, Liou B, Fannin V et al. · eLife 2026 · PMID 42334452 · doi:10.7554/eLife.109518
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE303993_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1298596 and SRA study SRP604762. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 6 more — browse all 6 samples with per-sample file links →

Similar datasets

Search all human RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.