← BioTransfer GEO Dataset Finder
GEO series

Lipid restriction in Familial Hypolipidemia 2 amplifies type I interferon response and suppresses IL-1beta production in a prenylation-dependent fashion

GSE307462 Homo sapiens Expression profiling by high throughput sequencing 9 samples Submitted 2025/11/28 Platform GPL24676
Summary
Familial Combined Hypolipidemia (FHBL2) is a genetic disorder caused by loss-of-function mutations in the Angiopoietin-like 3 (ANGPTL3) gene. FHBL2 subjects exhibit hypolipidemia and protection from cardiometabolic diseases. Here, we explored the hypothesis that immunometabolic events contribute to this phenotype. In FHBL2 subjects, circulating leukocytes exhibited lower content of intracellular lipids, together with a spontaneous type I IFN signature. Higher sensitivity to IFN stimulation was observed in FHBL2 monocytes ex vivo, as well as and in healthy monocytes deprived of lipids in vitro. Lipid restriction reduced mitochondrial metabolism and activated the mevalonate and isoprenoid synthetic pathway. Of note, a prenylation inhibitor reverted the high IFN response in lipid-deprived monocytes. Lipid restriction equaled IFN in repressing, in a prenylation-dependent fashion, the production of the inflammatory and proatherogenic cytokine IL-1. In summary, we uncovered a novel immunometabolic mechanism linking lipid deprivation in monocytes, isoprenoid synthesis, enhanced IFN response, and IL-1 control. This circuit may provide an immunometabolic basis for the protection from atherosclerotic diseases in hypolipidemic subjects.
Published in
Lipid deprivation amplifies type I IFN responses in monocytes through prenylation: insights from familial combined hypolipidemia type 2
Pinzon Grimaldos A, Pacella I, Giacomelli T et al. · Journal of translational medicine 2025 · PMID 41291732 · doi:10.1186/s12967-025-07448-5
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE307462_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 9 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1321758 and SRA study SRP618328. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 9 more — browse all 9 samples with per-sample file links →

Similar datasets

Search all human RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.