GEO series
OSR1 and SIX2 Drive Divergent Transcriptional Programs in Human Kidney Cells: Implications for Regeneration and Tumorigenesis\
GSE309076
Homo sapiens
Expression profiling by high throughput sequencing
13 samples
2025/09/26
GPL24676
Summary
During human nephrogenesis, nephron progenitor cells generate approximately one million nephrons. We investigated the effects of ectopic expression of OSR1 and SIX2, both individually and in combination, in adult human kidney cells. OSR1 and SIX2 induced distinct reprogramming programs with differential functional outcomes. SIX2 overexpression maintained epithelial morphology while significantly enhancing proliferation and clonogenic efficiency. Transcriptionally, SIX2 established epithelialization and cell cycle networks, downregulating proximal tubule markers, while upregulating distal nephron markers and proliferation genes. In vivo, SIX2-expressing cells formed organized tubular structures with distinct luminal architecture. In contrast, OSR1 overexpression induced morphological changes and activated developmental morphogenetic pathways but did not enhance proliferation and showed minimal tubulogenic capacity. RNA sequencing analysis revealed coordinated changes in nephron segment-specific markers and activation of distinct transcriptional programs.\
Download
NCBI GEO page ↗
Paper (PMID 41112069) ↗
{# Names what the click gives you. "Open in finder" meant nothing to a
visitor who arrived from a search engine and has never seen the tool. #}
Find more
human RNA-seq datasets →
Similar datasets
- GSE328275 Single-cell RNA sequencing of CD45+ immune cells across primary tumor, sentinel tumor-draining lymph node, and axillary lymph node in treatment-naive triple-negative breast cancer 28 samples
- GSE341753 Cohesin loading at regulatory elements shapes 3D genome folding during erythropoiesis [RNA-Seq] 12 samples
- GSE319969 Spatial and Bulk Transcriptomic Profiling Defines the Molecular Evolution of Cutaneous Squamous Cell Carcinoma and Reveals Stage-Specific Biomarkers of Clinical Relevance [RNA-Seq] 24 samples
- GSE313035 METIMMOX: Colorectal Cancer METastasis - Shaping Anti-tumor IMMunity by OXaliplatin 67 samples
- GSE342462 Integrated transcriptomic and bioelectrical profiling of stem-like cellular states in a colorectal cancer using SdFFF and UHF-DEP 12 samples
- GSE339456 Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [RNA-seq] 35 samples
- GSE199939 Comprehensive transcriptomic analysis of immune-related genes in diabetic foot ulcers: New insights into mechanisms and therapeutic targets 21 samples
- GSE341139 A conserved HAND2-BMP5-SMAD1/5/9 axis drives hepatic stellate cell activation and extracellular matrix overproduction in multiple fibrotic etiologies 10 samples
Share this dataset
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.