GEO series
PerturbPair: A Dual-Modality Platform Integrating Perturb-seq and Optical Pooled Screening to Map Cellular Responses and Enable Cross-Modal Inference
GSE312107
Mus musculus
Expression profiling by high throughput sequencing; Other
70 samples
2026/04/18
GPL13112
Summary
This dataset profiles transcriptional responses to genetic perturbations in primary bone marrow–derived macrophages (BMDMs) stimulated with lipopolysaccharide (LPS). Using a pooled CRISPR library targeting 1,030 genes (with ~4 sgRNAs per gene), we applied Perturb-seq to capture single-cell RNA sequencing (scRNA-seq) profiles at 9 hours post-LPS stimulation.
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