Cereblon expression is required for the anti-myeloma activity of lenalidomide and pomalidomide
ChIP-seq / ATAC-seq (genome binding and open chromatin) · human · 17 samples
- What it is
- ChIP-seq / ATAC-seq (genome binding and open chromatin)Where proteins bind the genome, or which regions are open and active.
- Organism
- Homo sapiens (human)
- Topic
- Multiple myelomaThis series is part of our curated briefing on it.
- Samples
- 17 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE31452_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: Look for peak files (.bed, .narrowPeak) and signal tracks (.bigWig) among the supplementary files; the raw reads are on ENA.
Also filed as BioProject PRJNA145825. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 17 more — browse all 17 samples with per-sample file links →
- GSE161195 Single cell RNA-seq of relapsed and refractory multiple myeloma patients defines new resistance pathways and targeted treatments 213 samples same disease briefing
- GSE155631 Oncogenic mechanisms of DIS3 mutations in Multiple Myeloma 62 samples same disease briefing
- GSE179453 Expression data from control-knockdown (CTR-KD) and MAST4-KD human multiple myeloma (MM) cell lines 6 samples same disease briefing
- GSE167969 ATAC-seq and RNA-Seq of Multiple Myeloma 46 samples same disease briefing
- GSE148715 “Direct to Drug” screening as a precision medicine tool in multiple myeloma 38 samples same disease briefing
- GSE178442 Genome-wide maps of transcription in DEAF1 overexpression(OE) and wildtype(WT) cells in Multiple Myeloma 4 samples same disease briefing
- GSE167968 RNA-seq of Multiple Myeloma 33 samples same disease briefing
- GSE178328 Genome-wide maps of chromatin state in DEAF1 overexpression (OE in Multiple Myeloma) 2 samples same disease briefing
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.