← BioTransfer GEO Dataset Finder
GEO series

CD44 antagonizing oHSV promotes the formation of tertiary lymphoid structures and improves anti-tumor immunity

GSE314573 Mus musculus Expression profiling by high throughput sequencing 4 samples Submitted 2026/07/01 Platform GPL24247
Summary
Oncolytic HSV (oHSV) therapy is currently approved for melanoma (in USA and EU) and recurrent brain tumors (conditional approval in Japan). To understand opportunities to improve therapeutic index, we analyzed transcriptomic changes in patients with recurrent brain tumors before and after treatment with CAN-3110. Gene set pathway analysis showed a significant enrichment of glycosaminoglycan (GAG) synthesis and extracellular matrix (ECM) interactions in patients after oHSV treatment. CD44 is a cell surface receptor that engages with receptors and also with ECM to orchestrate cell-ECM interactions. To evaluate the significance of the multiple CD44 regulated ECM interactions during virotherapy, we created an oHSV that encodes for the secreted extracellular CD44 (Ox44) which functions as a decoy receptor to inhibit cell-ECM interactions. Treatment with Ox44 also destabilized SLC7A11 (xCT) inducing oxidative stress and inhibiting antiviral STING signaling in infected tumor cells. Interestingly the ensuing increased viral burst and immunogenic cell death amplified innate immune activation in immune cells. This correlated with the induction of inflammatory cytokines like interferon (IFN) and IL-1 and the formation of tertiary lymphoid structures (TLS) in intracranial tumors. Single cell sequencing uncovered that Ox44-treated tumors had increased antigen presentation and increased T cell diversity and anti-tumor efficacy. To our knowledge, this is the first report to show that CD44 presents a barrier to both oncolytic virus replication as well as anti-tumor immunity.
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE314573_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 4 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1391530 and SRA study SRP656834. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 4 more — browse all 4 samples with per-sample file links →

Similar datasets

Search all mouse RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.