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CTCF promotes RNA pol II pausing and links DNA methylation to alternative splicing [RNA-Seq]

GSE31486 Homo sapiens Expression profiling by high throughput sequencing 6 samples Submitted 2011/10/06 Platform GPL10999
Summary
The goal of this study was to investigate the role of intragenic CTCF in alternative pre-mRNA splicing through a combined CTCF-ChIP-seq and RNA-seq approach. CTCF depletion led to decreased inclusion of weak upstream exons.
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Direct links to NCBI, no account and no request form: the whole study as GSE31486_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA154053 and SRA study SRP007885. Searching any of these in the dataset finder brings you back here.

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