← BioTransfer GEO Dataset Finder
GEO series

Modeling early human heart development using an iPSC-based 3D bioprinted model of embryonic heart tube

GSE315240 Homo sapiens Expression profiling by high throughput sequencing 9 samples Submitted 2026/02/18 Platform GPL21697Platform GPL24676
Summary
Human heart development is a precisely coordinated process involving dynamic transcriptional and morphological changes. Due to limited access to the developing human heart in utero and lack of accurate experimental models, the cell-microenvironmental interactions underlying human heart development remain elusive. Advances in 3D bioprinting and stem cell technologies have enabled the fabrication of in vitro analogues of cardiac tissues with complex structures, while incorporating cell intrinsic (genetic) and microenvironment factors. Here we present a perfusable 3D bioprinted model of human embryonic heart tube (eHT), composed of distinct layers of myocardium, cardiac jelly, and endocardium. Human induced pluripotent stem cell-derived cardiomyocytes and endothelial cells were cocultured in the engineered eHTs under dynamic flow. This system demonstrated robust cell viability and cardiac function, including full lumen endothelialization, progressive myocardial compaction, and global tissue contraction. A promoting effect of dynamic flow on cardiac maturation and cell lineage commitment was revealed by single-cell RNA sequencing. The established eHT model offers a novel research-enabling platform to study human heart development, various (congenital) heart disease, and therapeutic interventions.
Published in
Modeling early human heart development using an iPSC-based 3D bioprinted model of embryonic heart tube
Jin L, Park C, Neelakantan S et al. · Nature communications 2026 · PMID 42031752 · doi:10.1038/s41467-026-71565-y
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE315240_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 9 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1395394 and SRA study SRP658831. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 9 more — browse all 9 samples with per-sample file links →

Similar datasets

Search all human RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.