GEO series
ATAC-seq of the granulopoiesis lineage from different organs
GSE318435
Mus musculus
Genome binding/occupancy profiling by high throughput sequencing
34 samples
2026/04/17
GPL24247
Summary
We performed ATAC-seq of 7,000-50,000 ex-vivo flow-sorted cells from the granulopoietic tree in mice. For this we sorted Granulocyte-Macrophage Progenitors (GMP) from bone marrow (BM) and spleen (SP), Pre-Neutrophils (PreN) from BM and SP as well as Immature Neutrophils (imNeu) and Mature neutrophils (Neutro) from BM, SP and Blood (Bld). After sorting, cells were immediately processed using the OmniATAC protocol (Corces, Nat Methods 2014) and sequenced on a Novaseq-6000.
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Paper (PMID 41996475) ↗
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