Autoantibody Epitope Spreading in the Pre-Clinical Phase Predicts Progression to Rheumatoid Arthritis [ANALYTE: ANTIGEN]
human · 559 samples
- Organism
- Homo sapiens (human)
- Samples
- 559 samples
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI.
Read the full summary ↓
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE32016_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
Also filed as BioProject PRJNA154923. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 559 more — browse all 559 samples with per-sample file links →
- GSE342939 Senescent activated naive B cells promote anti-citrullinated antigen T cell responses and the transition to clinical rheumatoid arthritis 78 samples shares antigen, rheumatoid, arthritis
- GSE196301 Compartmentalization and persistence of dominant (regulatory) T cell clones indicates antigen skewing in juvenile idiopathic arthritis 48 samples shares antigen, arthritis
- GSE244184 Degradation of Ikaros prevents epigenetic progression of T cell exhaustion in novel antigen-specific assay 15 samples shares antigen, progression
- GSE244183 Degradation of Ikaros prevents epigenetic progression of T cell exhaustion in novel antigen-specific assay [bulk ATAC-seq] 11 samples shares antigen, progression
- GSE178494 Chromatin accessibility and transcriptomic changes underlying progression from islet autoantibody positivity to type 1 diabetes 89 samples shares autoantibody, progression
- GSE178493 Transcriptomic changes underlying progression from islet autoantibody positivity to type 1 diabetes 80 samples shares autoantibody, progression
- GSE249632 Longitudinal analysis of antigen-specific T cells after Shingrix vaccination 2866 samples shares antigen
- GSE242232 Autoantigen-specific CD4+ T cells acquire an exhausted phenotype and persist in human antigen-specific autoimmune diseases 928 samples shares antigen
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.