Analysis of ER stress-induced three-dimensional enhancer network in wild-type and transcription facotr-knockout HCT116 cells [ATAC-Seq]

Direct links to NCBI, no account and no request form: the whole study as GSE324342_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 4 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1434448 and SRA study SRP682325. Searching any of these in the dataset finder brings you back here.

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• GSE302930 Epigenetic Atlas of Bladder Cancer Reveals Master Transcription Factors and Risk-Associated Regulatory Elements in Luminal and Basal-Squamous Molecular Subtypes 92 samples
• GSE296190 Hypoxic regulation of chromatin and gene transcription [ChIP-seq] 84 samples
• GSE335058 Evolutionary guided transcription factor design programs novel T cell states [ChIP-Seq] 66 samples
• GSE303343 A unified network systems approach uncovers a core program underlying T follicular helper cell differentiation [CUT&RUN] 48 samples
• GSE282258 Imaging-based drug screening combined with moleuclar profiling identifies signatures and drivers of therapy resistance in pediatric AML [ATAC-seq] 44 samples
• GSE334112 Reversible epiblast regionalisation determines differentiation potential of human PSCs [ATAC-seq] 38 samples
• GSE316389 Chromatin accessibility and gene expression profiling of primary and metastatic ER+ breast cancer [ATAC-seq] 36 samples

Search all human ChIP / ATAC / CUT&Tag datasets in GEO →