Transcriptome Sequencing of BAPN-Induced Aortic Dissection in Male and Female Mice
RNA-seq (gene expression) · mouse · 48 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Mus musculus (mouse)
- Samples
- 48 samples: 6 conditions, mostly with about 10 replicates eachGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Integrated multi-omics analysis reveals a gut microbiota-tryptophan metabolism axis contributes to sex differences in a β-aminopropionitrile-induced aortic dissection mouse modelBiology of sex differences · 2026
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE325608_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1441253 and SRA study SRP685820. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 48 samples.
How we read this: 6 replicated groups read from 48 sample titles; they account for 48 of them. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM9609414 MaCon1 MaCon
- GSM9609415 MaCon2 MaCon
- GSM9609416 MaCon3 MaCon
- GSM9609417 MaCon4 MaCon
- GSM9609418 MaCon5 MaCon
- GSM9609419 MaCon6 MaCon
- GSM9609420 MaCon7 MaCon
- GSM9609421 MaCon8 MaCon
- GSM9609422 MaCon9 MaCon
- GSM9609423 MaCon10 MaCon
- GSM9609424 MaNonAD1 MaNonAD
- GSM9609425 MaNonAD2 MaNonAD
- GSM9609426 MaNonAD3 MaNonAD
- GSM9609427 MaNonAD4 MaNonAD
- GSM9609428 MaAAD1 MaAAD
- GSM9609429 MaAAD2 MaAAD
- GSM9609430 MaAAD3 MaAAD
- GSM9609431 MaAAD4 MaAAD
- GSM9609432 MaAAD5 MaAAD
- GSM9609433 MaAAD6 MaAAD
- GSM9609434 MaAAD7 MaAAD
- GSM9609435 FeCon1 FeCon
- GSM9609436 FeCon2 FeCon
- GSM9609437 FeCon3 FeCon
- GSM9609438 FeCon4 FeCon
- GSM9609439 FeCon5 FeCon
- GSM9609440 FeCon6 FeCon
- GSM9609441 FeCon7 FeCon
- GSM9609442 FeCon8 FeCon
- GSM9609443 FeCon9 FeCon
- GSM9609444 FeCon10 FeCon
- GSM9609445 FeNonAD1 FeNonAD
- GSM9609446 FeNonAD2 FeNonAD
- GSM9609447 FeNonAD3 FeNonAD
- GSM9609448 FeNonAD4 FeNonAD
- GSM9609449 FeNonAD5 FeNonAD
- GSM9609450 FeNonAD6 FeNonAD
- GSM9609451 FeNonAD7 FeNonAD
- GSM9609452 FeNonAD8 FeNonAD
- GSM9609453 FeAAD1 FeAAD
+ 8 more — browse all 48 samples with per-sample file links →
- GSE274057 Whole transcriptome sequencing for upper tract urothelial carcinoma (UTUC) of BALB/c female mice treated with N-butyl-N-(4-hydroxybutyl) nitrosamine (BBN) 37 samples shares female, male
- GSE252621 Interactions of Polychlorinated Biphenyls and Their Metabolites with the Brain and Liver Transcriptome of Female Mice 62 samples shares female, male
- GSE266221 Acute UV effect on epidermal transcriptome profiling in male and female Wild Type (SKH-1/SV129/BL6/J) mice and deficient for PPARbeta (SKH-1/SV129/BL6/J PPARD-/-) littermates. 32 samples shares female, male
- GSE324852 Preconception exposures of female mice to a panel of metabolic disruptors induce sexually dimorphic metabolic perturbations in their offspring 100 samples shares female, male
- GSE301052 Evaluation of an Anti-thyroid Mode of Action for Thyroid Follicular Cell Adenomas in Female Mice Exposed to Tertiary Butyl Alcohol 72 samples shares female, male
- GSE329024 Distinct HPO axis responses to chronic unpredictable stress in young versus adult female mice 63 samples shares female, male
- GSE282066 Accelerated Midlife Endocrine and Bioenergetic Brain Aging in APOE4 Female Mice 59 samples shares female, male
- GSE313674 Exposure of male mice to nicotine leads to metabolic dysfunction in their male and female offspring 40 samples shares female, male
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.