SNP array data from the Cancer Cell Line Encyclopedia (CCLE)

Direct links to NCBI, no account and no request form: the whole study as GSE36138_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 947 samples.

Also filed as BioProject PRJNA155797. Searching any of these in the dataset finder brings you back here.

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• GSE19399 Affymetrix 250K StyI SNP array data across multiple human cancer types 826 samples
• GSE62717 Affymetrix SNP 6.0 array data for ACRG Gastric Cancer Study 284 samples
• GSE21123 Affymetrix SNP array data for soft tissue sarcoma samples 415 samples
• GSE319641 RNA-Seq profiling of pre- and on-treatment tumor samples from breast cancer patients enrolled in the NeoTRIP trial. 401 samples
• GSE31168 Genetic Landscape of Copy Number Alterations in Gastric Cancer 291 samples
• GSE243013 A single-cell atlas of immune heterogeneity in anti-PD1-treated non-small cell lung cancer 243 samples
• GSE323973 Expression profiling by high throughput sequencing of breast cancer 158 samples
• GSE310353 In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment 116 samples

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