Genome-Wide Gene Expression Profiling of Spinal Cord Injury in Rat
Expression microarray · rat · 24 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Rattus norvegicus (rat)
- Samples
- 24 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE45006_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA192821. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 24 more — browse all 24 samples with per-sample file links →
- GSE322514 Engrailed-1 Potentiates Mitochondrial Transplant Neuroprotection in Spinal Cord Ischemia-Reperfusion Injury [OE] 6 samples shares spinal, injury, cord
- GSE322513 Engrailed-1 Potentiates Mitochondrial Transplant Neuroprotection in Spinal Cord Ischemia-Reperfusion Injury 6 samples shares spinal, injury, cord
- GSE322512 Engrailed-1 Potentiates Mitochondrial Transplant Neuroprotection in Spinal Cord Ischemia-Reperfusion Injury [RNA-Seq] 2 samples shares spinal, injury, cord
- GSE122060 Transcriptome data of rat bladder tissues of chronic bladder ischemia injury mediated detrusor underactive animal model 6 samples shares injury
- GSE253877 Genome-wide identification of target genes for the histone demethylase Phf8 in the oligodendroglial cell line CG4 [Phf8KO] 8 samples shares genome-wide
- GSE253878 Genome-wide identification of target genes for the histone demethylase Phf8 in the oligodendroglial cell line CG4 [Phf8OE] 4 samples shares genome-wide
- GSE342944 Azithromycin and its non-antibacterial derivative EP317 attenuate select aspects of ventilator-induced lung injury in rats 24 samples shares injury
- GSE82196 Changes in miRNAs in the dorsal root ganglion after CNS injury and intramuscular neurotrophin-3 treatment 18 samples shares injury
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.