GEO series

The metabolic niche of a prominent sulfate-reducing human gut bacterium

GSE48809 Bacteroides thetaiotaomicron VPI-5482; Bacteroides caccae ATCC 43185; Collinsella aerofaciens ATCC 25986; Escherichia coli str. K-12 substr. MG1655; Agathobacter rectalis ATCC 33656; Mus musculus; Marvinbryantia formatexigens DSM 14469; [Clostridium] symbiosum; Bacteroides ovatus ATCC 8483; Desulfovibrio piger GOR1 Expression profiling by high throughput sequencing; Other 135 samples Submitted 2013/07/12 Platform GPL17434Platform GPL13112Platform GPL17431Platform GPL17432Platform GPL17435Platform GPL17383Platform GPL17433

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Summary

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This dataset

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Download

Direct links to NCBI, no account and no request form: the whole study as GSE48809_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 135 samples. Raw sequencing reads are also available from ENA.

Whole study · RAW.tar ↓ Series matrix ↓ All supplementary files ↗ Raw reads on ENA ↗

Also filed as BioProject PRJNA211821 and SRA study SRP026386. Searching any of these in the dataset finder brings you back here.

NCBI GEO page ↗ Paper (PMID 23898195) ↗

Samples in this study

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+ 135 more — browse all 135 samples with per-sample file links →

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