GEO series

miRQC study, Agilent Platform data

GSE49453 Escherichia phage MS2; Homo sapiens Non-coding RNA profiling by array 20 samples Submitted 2014/06/10 Platform GPL15018

Summary

This data is a subset of the miRQC study, submitted for publication in summer of 2013. The purpose of the study was to compare various aspects of miRNA profiling platform performance (reproducibility, sensitivity, accuracy, etc) using a standardized set of samples. The data included in this submission is a subset of the study data generated on the Agilent miRNA profiling system. The array used was designed to measure all of the human and human viral miRNAs in miRBase 16.0 and the is annotated based on miRBase 18. Analysis for the miRQC study was based only on the human sequences present in miRBase 18 (8 sequences were deleted between 16.0 and 18.0)

This dataset

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Direct links to NCBI, no account and no request form: the whole study as GSE49453_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 20 samples.

Whole study · RAW.tar ↓ Series matrix ↓ All supplementary files ↗

Also filed as BioProject PRJNA213966. Searching any of these in the dataset finder brings you back here.

NCBI GEO page ↗ Paper (PMID 24973947) ↗

Samples in this study

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