Quantitative assessment of single-cell RNA sequencing methods

Direct links to NCBI, no account and no request form: the whole study as GSE51254_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 113 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA222225 and SRA study SRP030617. Searching any of these in the dataset finder brings you back here.

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+ 113 more — browse all 113 samples with per-sample file links →

• GSE243013 A single-cell atlas of immune heterogeneity in anti-PD1-treated non-small cell lung cancer 243 samples
• GSE263733 Single-cell transcriptome analysis reveals subtype-specific clonal evolution and microenvironmental changes in liver metastasis of pancreatic adenocarcinoma and their clinical implications 218 samples
• GSE282122 A longitudinal single-cell atlas of anti-tumour necrosis factor treatment in inflammatory bowel disease 216 samples
• GSE328048 Single-cell transcriptome reveals keratinocyte subclusters that contribute to altered differentiation and inflammatory responses in atopic dermatitis 116 samples
• GSE327167 Single-cell RNA-seq profiling of pleural mesothelioma and comparator pleural specimens 113 samples
• GSE308103 Single-nucleus RNA-sequencing (snRNA-seq) analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas 75 samples
• GSE266265 Endometrial Insights: Unmasking Endometriosis through Single-Cell Profiling and AI-Based Prediction 60 samples
• GSE202379 Single Nuclei RNA-Seq to map progression of non-alcoholic fatty liver disease (NAFLD) in patients II 59 samples

Search all human RNA-seq datasets in GEO →