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The distant Microbial communities in Tibetan alpine meadow based on Geochip 4.0

GSE52425 uncultured bacterium; Bacteria Genome variation profiling by array 63 samples Submitted 2013/11/16 Platform GPL17437
Summary
Due to its high altitude and extreme climate conditions, the Tibetan plateau is a region vulnerable to the impact of climate changes and anthropogenic perturbation, thus understanding how its microbial communities function may be of high importance. Here, we report a study to profile soil microbial structural genes, which infers functional roles of microbial communities, aiming to explore potential microbial responses to climate changes and anthropogenic perturbation. Using a microarray-based metagenomics tool named GeoChip 4.0, we showed that microbial communities in treatment site were distinct, compared with those in control site, e.g. shrubland vs grassland, grazing site vs ungrazing site, or warmer site vs colder site. Substantial variations were apparent in stress, N and C cycling genes, but they were in line with the functional roles of these genes.
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Direct links to NCBI, no account and no request form: the whole study as GSE52425_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 63 samples.

Also filed as BioProject PRJNA228912. Searching any of these in the dataset finder brings you back here.

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