Expression data from undifferentiated human ES cell line, khES3, grown using complete or methionine deprived media and ES cell derived endoderm
Expression microarray · human · 6 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 6 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE55283_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA239200. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 6 more — browse all 6 samples with per-sample file links →
- GSE55285 Expression data from undifferentiated human ES cell line, khES3, grown using complete, methionine, leucine or lysine deprived media and ES cell derived endoderm 9 samples shares khes3, undifferentiated, methionine, complete, deprived, endoderm, derived, grown
- GSE252905 Transcriptome analysis for XBP1 overexpressing complete hydatidiform mole-derived cell lines 12 samples shares complete, derived
- GSE280058 Complete phenotype rescue through the restoration of full-length dystrophin using CRISPR/Cas9 genome editing in Duchenne muscular dystrophy patient-derived iPSCs carrying the deletion of two exons 2 samples shares complete, derived
- GSE68004 Whole blood Transcriptional Profiles as a Prognostic and Diagnostic Tool in Complete and Incomplete Kawasaki Disease 162 samples shares complete
- GSE32646 GSTP1 expression predicts poor pathological complete response to neoadjuvant chemotherapy in ER-negative breast cancer 115 samples shares complete
- GSE23034 Incomplete DNA methylation underlies a transcriptional memory of somatic cells in human iPS cells 24 samples shares complete
- GSE21262 Expression data from undifferentiated and induced human pluripotent stem cells 11 samples shares undifferentiated
- GSE90152 Differential gene expression profiling in CD4+ T cells and CD19+ B cells between rituximab-treated complete remission (CR) and incomplete remission (IR) pemphigus patients 11 samples shares complete
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.