A three-dimensional map of the human genome at kilobase resolution reveals prinicples of chromatin looping

Direct links to NCBI, no account and no request form: the whole study as GSE63525_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 200 samples.

Also filed as BioProject PRJNA268125 and SRA study SRP050102. Searching any of these in the dataset finder brings you back here.

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+ 200 more — browse all 200 samples with per-sample file links →

• GSE320162 Minimizing far-extending chromatin perturbation in genome editing preserves stem cell identity [RNA-Seq] 347 samples
• GSE80006 Single-cell Hi-C reveals unique chromatin reorganization at oocyte-to-zygote transition 246 samples
• GSE336954 Central amygdala single-nucleus atlas reveals chromatin and gene transcription dynamics in human alcohol use disorder 126 samples
• GSE293172 Pioneer factors orchestrate tissue-specific cohesin-NIPBL chromatin entry and 3D genome organization [ChIP-seq] 68 samples
• GSE241849 Absolute quantitative and base-resolution sequencing reveals comprehensive landscape of pseudouridine across the human transcriptome 54 samples
• GSE320165 Minimizing far-extending chromatin perturbation in genome editing preserves stem cell identity [Cut&Tag] 46 samples
• GSE35156 Conserved Topological Domains in Mammalian Genomes Identified by High-resolution Analysis of Chromatin Interactions 9 samples
• GSE274495 The remodeling of bivalent chromatin is essential for mouse peri-implantation embryogenesis. 421 samples

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