Cell density, Her2 and progesterone signaling regulate dissemination of breast cancer cells [miRNA-Seq]
Non-coding RNA profiling · mouse · 15 samples
- What it is
- Non-coding RNA profilingLevels of RNAs that do not code for proteins, such as miRNA or lncRNA.
- Organism
- Mus musculus (mouse)
- Samples
- 15 samples
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE68682_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
Also filed as BioProject PRJNA283389 and SRA study SRP058132. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 15 more — browse all 15 samples with per-sample file links →
- GSE68683 Cell density, Her2 and progesterone signaling regulate dissemination of breast cancer cells 58 samples shares her2, dissemination, progesterone, regulate, density, breast
- GSE68681 Cell density, Her2 and progesterone signaling regulate dissemination of breast cancer cells [Gene expression] 43 samples shares her2, dissemination, progesterone, regulate, density, breast
- GSE301629 HER2∆16 directs luminal cell identity and estrogen receptor signaling in HER2+ breast cancer 10 samples shares her2, breast
- GSE256132 Differential effects of p95HER2 and FL-HER2 on gene expression in PB2 mouse breast tumor xenografts at early and late stages. 39 samples shares her2, breast
- GSE220203 Effect of p95HER2 overexpression on gene expression in PB2 mouse breast tumor xenografts. 18 samples shares her2, breast
- GSE276527 MAP3K1 mutations confer tumor immune heterogeneity in hormone receptor-positive HER2-negative breast cancer 6 samples shares her2, breast
- GSE299175 Epas1 expression is controlled by the progesterone receptor and regulates hCG-induced gene expression in Granulosa Cells during ovulation in mice. 16 samples shares progesterone, regulate
- GSE325457 Progesterone reshapes the tumor immune microenvironment towards macrophage-driven immune suppression in hormone receptor-positive breast cancer 5 samples shares progesterone, breast
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.