Cellular Aging of Mesenchymal Stem Cells (miRNA)
Non-coding RNA profiling · human · 14 samples
- What it is
- Non-coding RNA profilingLevels of RNAs that do not code for proteins, such as miRNA or lncRNA.
- Organism
- Homo sapiens (human)
- Samples
- 14 samples: 10 × miRNA BM-MSC_donor1–P vs 2 × miRNA BM-MSC_donor2–P vs 2 × miRNA BM-MSC_donor3–PGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE9664_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
Also filed as BioProject PRJNA103541. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 14 samples.
How we read this: 3 replicated groups read from 14 sample titles; they account for 14 of them. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM243940 miRNA BM-MSC_donor1–P2 miRNA BM-MSC_donor1–P
- GSM244220 miRNA BM-MSC_donor1–P3 miRNA BM-MSC_donor1–P
- GSM244224 miRNA BM-MSC_donor1–P4 miRNA BM-MSC_donor1–P
- GSM244228 miRNA BM-MSC_donor1–P5 miRNA BM-MSC_donor1–P
- GSM244232 miRNA BM-MSC_donor1–P6 miRNA BM-MSC_donor1–P
- GSM244235 miRNA BM-MSC_donor1–P7 miRNA BM-MSC_donor1–P
- GSM244237 miRNA BM-MSC_donor1–P8 miRNA BM-MSC_donor1–P
- GSM244239 miRNA BM-MSC_donor1–P9 miRNA BM-MSC_donor1–P
- GSM244241 miRNA BM-MSC_donor1–P10 miRNA BM-MSC_donor1–P
- GSM244243 miRNA BM-MSC_donor1–P11 miRNA BM-MSC_donor1–P
- GSM244249 miRNA BM-MSC_donor2–P2 miRNA BM-MSC_donor2–P
- GSM244254 miRNA BM-MSC_donor2–P7 miRNA BM-MSC_donor2–P
- GSM244259 miRNA BM-MSC_donor3–P2 miRNA BM-MSC_donor3–P
- GSM244263 miRNA BM-MSC_donor3–P8 miRNA BM-MSC_donor3–P
- GSE277909 Epigenetic attenuation of interferon signaling drives aging-related improvements in systemic lupus 271 samples shares aging, stem
- GSE278450 Glioblastoma scRNA-seq shows treatment-induced, immune-dependent increase in mesenchymal cancer cells and structural variants in distal neural stem cells 22 samples shares mesenchymal, stem
- GSE268953 Cellular senescence in skeletal muscle aging: new mechanisms and therapeutic potential for sarcopenia [snMultiome_ATAC+GEX] 20 samples shares cellular, aging
- GSE342462 Integrated transcriptomic and bioelectrical profiling of stem-like cellular states in a colorectal cancer using SdFFF and UHF-DEP 12 samples shares cellular, stem
- GSE14520 Gene expression data of human hepatocellular carcinoma (HCC) 488 samples shares cellular
- GSE10143 Gene Expression in Fixed Tissues and Outcome in Hepatocellular Carcinoma 387 samples shares cellular
- GSE318420 Immunosuppressive monocytes are enriched in hepatocellular carcinoma patients with liver dysfunction in a phase II trial of combination sorafenib and nivolumab 210 samples shares cellular
- GSE306201 Single-cell RNA sequencing reveals different cellular states in malignant cells and the tumor microenvironment in primary and metastatic ER-positive breast cancer 22 samples shares cellular
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.