Expression data from ALL samples for patients included in the Dutch Childhood Oncology Group
Expression microarray · human · 107 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 107 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Read the full summary ↓
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE13351_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA109831. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 107 more — browse all 107 samples with per-sample file links →
- GSE2109 Expression Project for Oncology (expO) 2158 samples shares oncology
- GSE13425 Expression data from ALL patients included in the set used to construct a classification signature (COALL cohort) 190 samples shares included
- GSE20142 Primary human leucocyte RNA expression of unrelated Dutch individuals. 1240 samples shares dutch
- GSE8052 Genetic variants regulating ORMDL3 expression are determinants of susceptibility to childhood asthma 404 samples shares childhood
- GSE20332 Primary human leukocyte RNA expression of unrelated Dutch and UK individuals 229 samples shares dutch
- GSE34309 Gene expression profiles of fibroblasts and fibroblast-reprogrammed induced pluripotent stem cells (iPSCs) from childhood cerebral adrenoleukodystrophy patients and healthy controls 18 samples shares childhood
- GSE11083 Childhood Onset Rheumatic Disease Gene Expression Profile 83 samples shares childhood
- GSE42002 Allele-specific FKBP5 DNA demethylation: a molecular mediator of gene-childhood trauma interactions 129 samples shares childhood
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.