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Transcriptome-based analysis reveals functional differences in Dendrobium officinale from different growing regions and with different quality levels

GSE171632 Mus musculus Expression profiling by high throughput sequencing 8 samples Submitted 2024/04/07 Platform GPL24247
Summary
Dendrobium officinale is a common and expensive traditional Chinese medicine used as a medicinal agent and food that has immunoregulatory and anti-inflammatory effects. Methods to authenticate D. officinale are lacking. Although chemical profiles of D. officinale were published, transcriptomic profiling is lacking. Here, we collected D. officinale from two regions (Yunnan and Miandian) and the analogue D. compactum. The Yunnan samples had three different quality levels. All samples were subjected to genome-wide biological response fingerprinting (BioReF) in RAW264.7 cells using RNA sequencing.
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Direct links to NCBI, no account and no request form: the whole study as GSE171632_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 8 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA720379 and SRA study SRP313811. Searching any of these in the dataset finder brings you back here.

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