BI Human Reference Epigenome Mapping Project

Direct links to NCBI, no account and no request form: the whole study as GSE17312_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 633 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA34535 and SRA study SRP000996. Searching any of these in the dataset finder brings you back here.

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+ 633 more — browse all 633 samples with per-sample file links →

• GSE15735 Genome-wide mapping of HATs and HDACs in human CD4+ T cells 41 samples
• GSE314342 Genome-scale perturb-seq in primary human CD4+ T cells reveals genes regulating T cell programs and human immune traits. 577 samples
• GSE205672 Transcriptomes of human PBMCs and monocytes in sepsis patients 460 samples
• GSE319641 RNA-Seq profiling of pre- and on-treatment tumor samples from breast cancer patients enrolled in the NeoTRIP trial. 401 samples
• GSE309595 Longitudinal Analysis of Multiple Myeloma: Therapeutic Response and Immune Microenvironment Dynamics in the Context of Tumor Heterogeneity [scRNA-seq] 270 samples
• GSE243013 A single-cell atlas of immune heterogeneity in anti-PD1-treated non-small cell lung cancer 243 samples
• GSE263733 Single-cell transcriptome analysis reveals subtype-specific clonal evolution and microenvironmental changes in liver metastasis of pancreatic adenocarcinoma and their clinical implications 218 samples
• GSE282122 A longitudinal single-cell atlas of anti-tumour necrosis factor treatment in inflammatory bowel disease 216 samples

Search all human ChIP / ATAC / CUT&Tag datasets in GEO →