Effect of Lactobacillus plantarum MB452 on the gene expression of the intestinal epithelial cell line Caco-2
Expression microarray · human · 8 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 8 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE18372_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA118139. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 8 more — browse all 8 samples with per-sample file links →
- GSE276364 Comparison of iPSC-derived human intestinal epithelial cells with Caco-2 cells and human in vivo data after exposure to Lactiplantibacillus plantarum WCFS1 36 samples shares caco-2, intestinal, epithelial, plantarum
- GSE268603 Transport of perfluoroalkyl substances across human induced pluripotent stem cell-derived intestinal epithelial cells in comparison with primary human intestinal epithelial cells and Caco-2 cells 12 samples shares caco-2, intestinal, epithelial
- GSE283451 Air-liquid_interface_Caco-2_culture_with_vasointestinal_peptide_ mimicks_ gut_ mucosal_ barrier_ function_ in_ permeability_ and_bacterial infection 17 samples shares caco-2, intestinal
- GSE276369 Comparative Analysis of Caco-2 Cells and Human Jejunal and Duodenal Enteroid-derived Cells in Gel- and Membrane-Based Barrier Models of Intestinal Permeability 13 samples shares caco-2, intestinal
- GSE320151 Transcriptomic profiling reveals substrate- and shear stress_x0002_dependent maturation of human small intestinal epithelial cells 58 samples shares intestinal, epithelial
- GSE282444 Epigenetic Memory of Intestinal Epithelial Cells in Inflammatory Bowel Disease [RNA-seq] 56 samples shares intestinal, epithelial
- GSE261040 Epithelial relay of microbial signals coordinates intestinal macrophage supported barrier repair 48 samples shares intestinal, epithelial
- GSE300313 Hypoxia increases susceptibility of human intestinal epithelial cells to rotavirus infection through repression of interferon induction 32 samples shares intestinal, epithelial
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.