Genome-wide DNA methylation profiling of Acute Myeloid Leukemia
DNA methylation · human · 352 samples
- What it is
- DNA methylationChemical marks on DNA that help switch genes on or off.
- Organism
- Homo sapiens (human)
- Topic
- Acute myeloid leukemiaThis series is part of our curated briefing on it.
- Samples
- 352 samples: 345 distinct titles, 1 of them repeatedGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI.
Read the full summary ↓
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE18700_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: Look for beta-value tables or raw IDAT files among the supplementary files.
Also filed as BioProject PRJNA121487. Searching any of these in the dataset finder brings you back here.
How we read this: Read from 352 sample titles: 345 distinct titles with little repetition. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM435212 Normal_CD34(+)_#1
- GSM435213 Normal_CD34(+)_#2
- GSM435214 Normal_CD34(+)_#3
- GSM435215 Normal_CD34(+)_#4
- GSM435216 Normal_CD34(+)_#5
- GSM435217 Normal_CD34(+)_#6
- GSM435218 Normal_CD34(+)_#7
- GSM435219 Normal_CD34(+)_#8
- GSM464737 322
- GSM464738 1174
- GSM464739 1188
- GSM464740 1299
- GSM464741 1316
- GSM464742 1432
- GSM464743 1448
- GSM464744 1595
- GSM464745 1747
- GSM464746 1766
- GSM464747 2170
- GSM464748 2171
- GSM464749 2172
- GSM464750 2173
- GSM464751 2175
- GSM464752 2176
- GSM464753 2177
- GSM464754 2179
- GSM464755 2181
- GSM464756 2182
- GSM464757 2183
- GSM464758 2185
- GSM464759 2186
- GSM464760 2187
- GSM464761 2188
- GSM464762 2189
- GSM464763 2190
- GSM464764 2191
- GSM464765 2192
- GSM464766 2193
- GSM464767 2194
- GSM464768 2195
+ 312 more — browse all 352 samples with per-sample file links →
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Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.